Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt88Q9CPR6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Gm715-201ENSMUST00000117865 831 ntBASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Gm16061-201ENSMUST00000122167 857 ntBASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Gm21814-202ENSMUST00000203277 873 ntBASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Krt88Q9CPR6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.09□□□□□ -0.15
Krt88Q9CPR6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Krt88Q9CPR6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.08□□□□□ -0.15
Krt88Q9CPR6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt88Q9CPR6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt88Q9CPR6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt88Q9CPR6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt88Q9CPR6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Gm7213-201ENSMUST00000215977 950 ntBASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms