Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.27■□□□□ 0.04
Trim16Q99PP9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim16Q99PP9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim16Q99PP9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim16Q99PP9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Mir3081-201ENSMUST00000175305 84 ntBASIC15.26■□□□□ 0.03
Trim16Q99PP9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Gm17807-201ENSMUST00000186869 298 ntBASIC15.26■□□□□ 0.03
Trim16Q99PP9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim16Q99PP9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim16Q99PP9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim16Q99PP9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.25■□□□□ 0.03
Trim16Q99PP9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.25■□□□□ 0.03
Trim16Q99PP9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim16Q99PP9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.24■□□□□ 0.03
Trim16Q99PP9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim16Q99PP9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms