Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.48■□□□□ 0.07
Trim33Q99PP7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim33Q99PP7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim33Q99PP7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.47■□□□□ 0.07
Trim33Q99PP7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim33Q99PP7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.46■□□□□ 0.07
Trim33Q99PP7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim33Q99PP7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim33Q99PP7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.46■□□□□ 0.06
Trim33Q99PP7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim33Q99PP7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.46■□□□□ 0.06
Trim33Q99PP7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.45■□□□□ 0.06
Trim33Q99PP7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim33Q99PP7 Gm34391-201ENSMUST00000203706 907 ntBASIC15.45■□□□□ 0.06
Trim33Q99PP7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.45■□□□□ 0.06
Trim33Q99PP7 Gm9172-201ENSMUST00000212092 954 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms