Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Gm14767-201ENSMUST00000121559 586 ntBASIC15.76■□□□□ 0.11
Cdh23Q99PF4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Gm27533-201ENSMUST00000183800 152 ntBASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Asic1-205ENSMUST00000228185 1818 ntBASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdh23Q99PF4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Gm6266-201ENSMUST00000203844 806 ntBASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdh23Q99PF4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Gm9908-201ENSMUST00000211534 448 ntBASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdh23Q99PF4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms