Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh4Q99MT2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh4Q99MT2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh4Q99MT2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh4Q99MT2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh4Q99MT2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.21■□□□□ 0.03
Msh4Q99MT2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.21■□□□□ 0.03
Msh4Q99MT2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh4Q99MT2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh4Q99MT2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh4Q99MT2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Msh4Q99MT2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh4Q99MT2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Msh4Q99MT2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh4Q99MT2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Msh4Q99MT2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Msh4Q99MT2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Gm7461-201ENSMUST00000058918 827 ntBASIC15.2■□□□□ 0.02
Msh4Q99MT2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh4Q99MT2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.19■□□□□ 0.02
Msh4Q99MT2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Msh4Q99MT2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh4Q99MT2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh4Q99MT2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Msh4Q99MT2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.18■□□□□ 0.02
Msh4Q99MT2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.18■□□□□ 0.02
Msh4Q99MT2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Msh4Q99MT2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms