Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tlr3Q99MB1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.72■□□□□ 0.27
Tlr3Q99MB1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Gm19164-201ENSMUST00000210667 640 ntBASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tlr3Q99MB1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Tlr3Q99MB1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tlr3Q99MB1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Gm8097-201ENSMUST00000117903 829 ntBASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Gm8344-201ENSMUST00000119813 856 ntBASIC16.7■□□□□ 0.26
Tlr3Q99MB1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Gm2651-201ENSMUST00000203560 838 ntBASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tlr3Q99MB1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms