Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx6-1Q99MA9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm9385-201ENSMUST00000117563 472 ntBASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Rpph1-201ENSMUST00000175096 319 ntBASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm24158-201ENSMUST00000175263 71 ntBASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm10253-201ENSMUST00000194270 940 ntBASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx6-1Q99MA9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms