Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Gm27742-201ENSMUST00000184667 60 ntBASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1b1Q99LU0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Gm15794-201ENSMUST00000120182 631 ntBASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Gm10819-201ENSMUST00000099988 561 ntBASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.76□□□□□ -0.05
Chmp1b1Q99LU0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1b1Q99LU0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Gm17807-201ENSMUST00000186869 298 ntBASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1b1Q99LU0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms