Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clp1Q99LI9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Clp1Q99LI9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.39■□□□□ 0.21
Clp1Q99LI9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.39■□□□□ 0.21
Clp1Q99LI9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.39■□□□□ 0.21
Clp1Q99LI9 Gm10154-201ENSMUST00000084445 354 ntBASIC16.39■□□□□ 0.21
Clp1Q99LI9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clp1Q99LI9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.38■□□□□ 0.21
Clp1Q99LI9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.38■□□□□ 0.21
Clp1Q99LI9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.38■□□□□ 0.21
Clp1Q99LI9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clp1Q99LI9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.37■□□□□ 0.21
Clp1Q99LI9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.37■□□□□ 0.21
Clp1Q99LI9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.37■□□□□ 0.21
Clp1Q99LI9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.37■□□□□ 0.21
Clp1Q99LI9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.37■□□□□ 0.21
Clp1Q99LI9 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.37■□□□□ 0.21
Clp1Q99LI9 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms