Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Gm11950-201ENSMUST00000121615 838 ntBASIC14.22□□□□□ -0.13
Lims1Q99JW4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.21□□□□□ -0.13
Lims1Q99JW4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.21□□□□□ -0.13
Lims1Q99JW4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Efs-202ENSMUST00000227037 2540 ntBASIC14.21□□□□□ -0.13
Lims1Q99JW4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lims1Q99JW4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lims1Q99JW4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Gm15794-201ENSMUST00000120182 631 ntBASIC14.2□□□□□ -0.14
Lims1Q99JW4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.2□□□□□ -0.14
Lims1Q99JW4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lims1Q99JW4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms