Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.76■□□□□ 0.11
Cdk9Q99J95 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.76■□□□□ 0.11
Cdk9Q99J95 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdk9Q99J95 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.75■□□□□ 0.11
Cdk9Q99J95 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.75■□□□□ 0.11
Cdk9Q99J95 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdk9Q99J95 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.74■□□□□ 0.11
Cdk9Q99J95 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Gm27463-201ENSMUST00000183569 57 ntBASIC15.74■□□□□ 0.11
Cdk9Q99J95 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.74■□□□□ 0.11
Cdk9Q99J95 Gm43799-201ENSMUST00000201845 579 ntBASIC15.74■□□□□ 0.11
Cdk9Q99J95 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.74■□□□□ 0.11
Cdk9Q99J95 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdk9Q99J95 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Gm13836-201ENSMUST00000121159 501 ntBASIC15.73■□□□□ 0.11
Cdk9Q99J95 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.73■□□□□ 0.11
Cdk9Q99J95 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.73■□□□□ 0.11
Cdk9Q99J95 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.73■□□□□ 0.11
Cdk9Q99J95 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdk9Q99J95 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.72■□□□□ 0.11
Cdk9Q99J95 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.72■□□□□ 0.11
Cdk9Q99J95 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms