Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.38■□□□□ 0.53
Col20a1Q923P0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.38■□□□□ 0.53
Col20a1Q923P0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.37■□□□□ 0.53
Col20a1Q923P0 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.37■□□□□ 0.53
Col20a1Q923P0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.37■□□□□ 0.53
Col20a1Q923P0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col20a1Q923P0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Gm23935-201ENSMUST00000102303 57 ntBASIC18.36■□□□□ 0.53
Col20a1Q923P0 Gm24270-201ENSMUST00000102326 57 ntBASIC18.36■□□□□ 0.53
Col20a1Q923P0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Gm24245-201ENSMUST00000157318 57 ntBASIC18.36■□□□□ 0.53
Col20a1Q923P0 Gm17271-201ENSMUST00000165535 355 ntBASIC18.36■□□□□ 0.53
Col20a1Q923P0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Gm18246-201ENSMUST00000221023 728 ntBASIC18.36■□□□□ 0.53
Col20a1Q923P0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col20a1Q923P0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.35■□□□□ 0.53
Col20a1Q923P0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col20a1Q923P0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.35■□□□□ 0.53
Col20a1Q923P0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.35■□□□□ 0.53
Col20a1Q923P0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.35■□□□□ 0.53
Col20a1Q923P0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Dancr-204ENSMUST00000132389 2347 ntBASIC18.35■□□□□ 0.53
Col20a1Q923P0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col20a1Q923P0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.34■□□□□ 0.53
Col20a1Q923P0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms