Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Birc2-201ENSMUST00000054878 378 ntBASIC16.02■□□□□ 0.16
Pcdhb6Q91XZ4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdhb6Q91XZ4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb6Q91XZ4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb6Q91XZ4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb6Q91XZ4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb6Q91XZ4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Pcdhb6Q91XZ4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Gm15358-201ENSMUST00000119249 520 ntBASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb6Q91XZ4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb6Q91XZ4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Gm11780-201ENSMUST00000136880 516 ntBASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb6Q91XZ4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms