Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Mir6404-201ENSMUST00000183699 94 ntBASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Gm18195-201ENSMUST00000207604 706 ntBASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga4Q91XY4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Gm25745-201ENSMUST00000174945 133 ntBASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga4Q91XY4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga4Q91XY4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Gm25406-201ENSMUST00000157599 105 ntBASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga4Q91XY4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhga4Q91XY4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga4Q91XY4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga4Q91XY4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga4Q91XY4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga4Q91XY4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhga4Q91XY4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Pcdhga4Q91XY4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms