Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H1fooQ8VIK3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.08□□□□□ -0.31
H1fooQ8VIK3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H1fooQ8VIK3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H1fooQ8VIK3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Gm25406-201ENSMUST00000157599 105 ntBASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Mir3081-201ENSMUST00000175305 84 ntBASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Gm27704-201ENSMUST00000185094 107 ntBASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H1fooQ8VIK3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H1fooQ8VIK3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Gm7284-201ENSMUST00000131667 944 ntBASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Gm44454-201ENSMUST00000198541 138 ntBASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H1fooQ8VIK3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms