Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.55■□□□□ 0.24
TraipQ8VIG6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TraipQ8VIG6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Gm27301-201ENSMUST00000184012 127 ntBASIC16.55■□□□□ 0.24
TraipQ8VIG6 Gm17968-201ENSMUST00000194902 784 ntBASIC16.55■□□□□ 0.24
TraipQ8VIG6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Gm17271-201ENSMUST00000165535 355 ntBASIC16.54■□□□□ 0.24
TraipQ8VIG6 Gm5177-201ENSMUST00000183092 997 ntBASIC16.54■□□□□ 0.24
TraipQ8VIG6 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.54■□□□□ 0.24
TraipQ8VIG6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.54■□□□□ 0.24
TraipQ8VIG6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TraipQ8VIG6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Gm2272-201ENSMUST00000194903 582 ntBASIC16.53■□□□□ 0.24
TraipQ8VIG6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.53■□□□□ 0.24
TraipQ8VIG6 Gm45612-201ENSMUST00000211320 160 ntBASIC16.53■□□□□ 0.24
TraipQ8VIG6 Gm18246-201ENSMUST00000221023 728 ntBASIC16.53■□□□□ 0.24
TraipQ8VIG6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.53■□□□□ 0.24
TraipQ8VIG6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TraipQ8VIG6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Gm14822-201ENSMUST00000122247 291 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms