Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 AY702102-202ENSMUST00000194651 1173 ntBASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Gm18057-201ENSMUST00000208220 503 ntBASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm13829-201ENSMUST00000119600 138 ntBASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm11478-201ENSMUST00000117851 599 ntBASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cspg4Q8VHY0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Mir1247-201ENSMUST00000116706 82 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Rarb-207ENSMUST00000225921 2756 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Mir7684-201ENSMUST00000183858 60 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cspg4Q8VHY0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms