Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.07■□□□□ 0
Rnf8Q8VC56 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.07■□□□□ 0
Rnf8Q8VC56 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Rnf8Q8VC56 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.07■□□□□ 0
Rnf8Q8VC56 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf8Q8VC56 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rnf8Q8VC56 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rnf8Q8VC56 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Gm27742-201ENSMUST00000184667 60 ntBASIC15.06■□□□□ 0
Rnf8Q8VC56 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rnf8Q8VC56 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.06■□□□□ 0
Rnf8Q8VC56 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf8Q8VC56 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf8Q8VC56 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Rnf8Q8VC56 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.05■□□□□ 0
Rnf8Q8VC56 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf8Q8VC56 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Rnf8Q8VC56 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.05■□□□□ -0
Rnf8Q8VC56 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Rnf8Q8VC56 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.05■□□□□ -0
Rnf8Q8VC56 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rnf8Q8VC56 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rnf8Q8VC56 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms