Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpap2Q8VC34 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Gm27646-201ENSMUST00000183989 110 ntBASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Gm6376-201ENSMUST00000209407 580 ntBASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpap2Q8VC34 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.09■□□□□ 0.33
Rpap2Q8VC34 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.09■□□□□ 0.33
Rpap2Q8VC34 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Asic1-205ENSMUST00000228185 1818 ntBASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpap2Q8VC34 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpap2Q8VC34 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpap2Q8VC34 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rpap2Q8VC34 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rpap2Q8VC34 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpap2Q8VC34 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Gm6089-201ENSMUST00000197666 938 ntBASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpap2Q8VC34 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Gm25990-201ENSMUST00000102440 86 ntBASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms