Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chrna3Q8R4G9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Gm15590-201ENSMUST00000078419 552 ntBASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.3■□□□□ 0.04
Chrna3Q8R4G9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Gm15358-201ENSMUST00000119249 520 ntBASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Gm43514-201ENSMUST00000198852 424 ntBASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Chrna3Q8R4G9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms