Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.8■□□□□ 0.12
Slf1Q8R3P9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Gm12134-201ENSMUST00000122109 520 ntBASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slf1Q8R3P9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slf1Q8R3P9 Efs-202ENSMUST00000227037 2540 ntBASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slf1Q8R3P9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms