Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim2Q8R1G6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Gm12085-201ENSMUST00000119263 940 ntBASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim2Q8R1G6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim2Q8R1G6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim2Q8R1G6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pdlim2Q8R1G6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim2Q8R1G6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim2Q8R1G6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms