Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm25144-201ENSMUST00000179561 110 ntBASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Gm25352-201ENSMUST00000179815 110 ntBASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx54Q8K4L0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Gm18737-201ENSMUST00000173594 937 ntBASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx54Q8K4L0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Gm12859-201ENSMUST00000117834 427 ntBASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Gm14767-201ENSMUST00000121559 586 ntBASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Gm29541-201ENSMUST00000191351 678 ntBASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 AL593843.1-201ENSMUST00000195891 145 ntBASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ddx54Q8K4L0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Gm10499-201ENSMUST00000174094 934 ntBASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Gm27838-201ENSMUST00000184829 128 ntBASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Gm28630-201ENSMUST00000187806 498 ntBASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Gm6745-201ENSMUST00000199216 526 ntBASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx54Q8K4L0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Gm8318-201ENSMUST00000182954 872 ntBASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Gm6218-201ENSMUST00000219812 628 ntBASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 AC154239.3-201ENSMUST00000226933 674 ntBASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 AC149294.4-201ENSMUST00000227870 882 ntBASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.29■□□□□ 0.84
Ddx54Q8K4L0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms