Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col23a1Q8K4G2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Gm8602-201ENSMUST00000184045 607 ntBASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Mir6420-201ENSMUST00000185032 102 ntBASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Gm18062-201ENSMUST00000208020 547 ntBASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Gm18055-201ENSMUST00000208254 547 ntBASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col23a1Q8K4G2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col23a1Q8K4G2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Gm14722-201ENSMUST00000118943 689 ntBASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Gm9908-201ENSMUST00000211534 448 ntBASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col23a1Q8K4G2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col23a1Q8K4G2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Gm13829-201ENSMUST00000119600 138 ntBASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Gm6007-201ENSMUST00000208170 823 ntBASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Col23a1Q8K4G2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms