Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm12497-201ENSMUST00000138778 237 ntBASIC14.74□□□□□ -0.05
Clrn1Q8K445 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.73□□□□□ -0.05
Clrn1Q8K445 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.73□□□□□ -0.05
Clrn1Q8K445 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clrn1Q8K445 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.72□□□□□ -0.05
Clrn1Q8K445 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.72□□□□□ -0.05
Clrn1Q8K445 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Clrn1Q8K445 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.72□□□□□ -0.05
Clrn1Q8K445 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clrn1Q8K445 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.72□□□□□ -0.05
Clrn1Q8K445 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Clrn1Q8K445 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.71□□□□□ -0.05
Clrn1Q8K445 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.71□□□□□ -0.05
Clrn1Q8K445 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clrn1Q8K445 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clrn1Q8K445 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clrn1Q8K445 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clrn1Q8K445 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clrn1Q8K445 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms