Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC9.84□□□□□ -0.83
Cystm1Q8K353 Gm11539-201ENSMUST00000119837 557 ntBASIC9.84□□□□□ -0.83
Cystm1Q8K353 Gm13436-201ENSMUST00000120418 567 ntBASIC9.84□□□□□ -0.83
Cystm1Q8K353 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Gm12134-201ENSMUST00000122109 520 ntBASIC9.84□□□□□ -0.83
Cystm1Q8K353 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Gm38027-201ENSMUST00000192315 235 ntBASIC9.84□□□□□ -0.83
Cystm1Q8K353 Gm10517-202ENSMUST00000192970 758 ntBASIC9.84□□□□□ -0.83
Cystm1Q8K353 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Otx2os1-204ENSMUST00000227221 751 ntBASIC9.83□□□□□ -0.84
Cystm1Q8K353 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cystm1Q8K353 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cystm1Q8K353 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Gm9694-201ENSMUST00000193347 1189 ntBASIC9.82□□□□□ -0.84
Cystm1Q8K353 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms