Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Gm11452-201ENSMUST00000122376 690 ntBASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn1Q8K0T0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Gm25990-201ENSMUST00000102440 86 ntBASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Mir8098-201ENSMUST00000184011 137 ntBASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn1Q8K0T0 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn1Q8K0T0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Gm15358-201ENSMUST00000119249 520 ntBASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn1Q8K0T0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms