Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcll1Q8JZS7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcll1Q8JZS7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Hmgcll1Q8JZS7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Hmgcll1Q8JZS7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Hmgcll1Q8JZS7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Gm4995-201ENSMUST00000117247 432 ntBASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgcll1Q8JZS7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Gm13597-201ENSMUST00000121239 375 ntBASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Mir8117-201ENSMUST00000184773 107 ntBASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Gm43073-201ENSMUST00000198200 1189 ntBASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Gm7229-201ENSMUST00000214719 1007 ntBASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Gm10175-201ENSMUST00000086013 645 ntBASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgcll1Q8JZS7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms