Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.19■□□□□ 0.66
Smc4Q8CG47 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.19■□□□□ 0.66
Smc4Q8CG47 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc4Q8CG47 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Gm27300-201ENSMUST00000184085 97 ntBASIC19.18■□□□□ 0.66
Smc4Q8CG47 Gm27335-201ENSMUST00000184758 97 ntBASIC19.18■□□□□ 0.66
Smc4Q8CG47 Mir8117-201ENSMUST00000184773 107 ntBASIC19.18■□□□□ 0.66
Smc4Q8CG47 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.18■□□□□ 0.66
Smc4Q8CG47 Gm5867-201ENSMUST00000063197 592 ntBASIC19.18■□□□□ 0.66
Smc4Q8CG47 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.18■□□□□ 0.66
Smc4Q8CG47 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc4Q8CG47 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.17■□□□□ 0.66
Smc4Q8CG47 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc4Q8CG47 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.16■□□□□ 0.66
Smc4Q8CG47 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc4Q8CG47 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.15■□□□□ 0.66
Smc4Q8CG47 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms