Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc5Q8CG46 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Gm29518-201ENSMUST00000190858 372 ntBASIC19.28■□□□□ 0.68
Smc5Q8CG46 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc5Q8CG46 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm14722-201ENSMUST00000118943 689 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm8825-201ENSMUST00000182565 998 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm4518-201ENSMUST00000182638 718 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm17808-201ENSMUST00000200859 894 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.27■□□□□ 0.68
Smc5Q8CG46 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc5Q8CG46 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc5Q8CG46 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms