Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc178Q8CDV0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc178Q8CDV0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc178Q8CDV0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Gm7862-201ENSMUST00000121461 292 ntBASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Gm18733-201ENSMUST00000173950 856 ntBASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc178Q8CDV0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.47■□□□□ 0.55
Ccdc178Q8CDV0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Ccdc178Q8CDV0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ccdc178Q8CDV0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc178Q8CDV0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc178Q8CDV0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Ccdc178Q8CDV0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Ccdc178Q8CDV0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms