Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Gm45167-201ENSMUST00000208007 322 ntBASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf31Q8CCF0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf31Q8CCF0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf31Q8CCF0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf31Q8CCF0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf31Q8CCF0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf31Q8CCF0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf31Q8CCF0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
Prpf31Q8CCF0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf31Q8CCF0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Gm8000-201ENSMUST00000188378 592 ntBASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms