Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shisa4Q8CA71 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Gm10576-201ENSMUST00000191927 825 ntBASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shisa4Q8CA71 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shisa4Q8CA71 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Auts2-212ENSMUST00000178555 309 ntBASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shisa4Q8CA71 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.02■□□□□ 0.48
Shisa4Q8CA71 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms