Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm27618-201ENSMUST00000183671 60 ntBASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp1Q8C8C1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm27306-201ENSMUST00000183970 107 ntBASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Mir8102-201ENSMUST00000184148 139 ntBASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm27989-201ENSMUST00000184721 107 ntBASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rtp1Q8C8C1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Gm12008-201ENSMUST00000117791 755 ntBASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rtp1Q8C8C1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtp1Q8C8C1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Gm17837-201ENSMUST00000186435 985 ntBASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Gm38294-201ENSMUST00000192831 381 ntBASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Gm7653-201ENSMUST00000214567 508 ntBASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtp1Q8C8C1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms