Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Gm27301-201ENSMUST00000184012 127 ntBASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptcd1Q8C2E4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Gm25948-201ENSMUST00000175334 112 ntBASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptcd1Q8C2E4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ptcd1Q8C2E4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ptcd1Q8C2E4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Ptcd1Q8C2E4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ptcd1Q8C2E4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Gm11745-201ENSMUST00000121669 448 ntBASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Gm18489-201ENSMUST00000172565 551 ntBASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ptcd1Q8C2E4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms