Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smim4Q8C1Q6 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Gm25016-201ENSMUST00000158399 131 ntBASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.08□□□□□ -0.32
Smim4Q8C1Q6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Gm11950-201ENSMUST00000121615 838 ntBASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim4Q8C1Q6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim4Q8C1Q6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms