Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cps1Q8C196 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.77■□□□□ 0.92
Cps1Q8C196 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cps1Q8C196 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cps1Q8C196 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Cps1Q8C196 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cps1Q8C196 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC20.76■□□□□ 0.91
Cps1Q8C196 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.76■□□□□ 0.91
Cps1Q8C196 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cps1Q8C196 Gm44344-201ENSMUST00000200287 129 ntBASIC20.76■□□□□ 0.91
Cps1Q8C196 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC20.76■□□□□ 0.91
Cps1Q8C196 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cps1Q8C196 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC20.75■□□□□ 0.91
Cps1Q8C196 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cps1Q8C196 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Gm7653-201ENSMUST00000214567 508 ntBASIC20.75■□□□□ 0.91
Cps1Q8C196 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cps1Q8C196 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cps1Q8C196 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.75■□□□□ 0.91
Cps1Q8C196 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.74■□□□□ 0.91
Cps1Q8C196 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Ighv8-7-201ENSMUST00000194349 297 ntBASIC20.74■□□□□ 0.91
Cps1Q8C196 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cps1Q8C196 Gm44855-201ENSMUST00000205725 362 ntBASIC20.74■□□□□ 0.91
Cps1Q8C196 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Cps1Q8C196 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Gm3365-201ENSMUST00000216296 1480 ntBASIC20.74■□□□□ 0.91
Cps1Q8C196 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
Cps1Q8C196 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cps1Q8C196 Gm16215-201ENSMUST00000161990 637 ntBASIC20.73■□□□□ 0.91
Cps1Q8C196 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Cps1Q8C196 Gm27989-201ENSMUST00000184721 107 ntBASIC20.73■□□□□ 0.91
Cps1Q8C196 Gm43767-201ENSMUST00000198933 381 ntBASIC20.73■□□□□ 0.91
Cps1Q8C196 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.73■□□□□ 0.91
Cps1Q8C196 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cps1Q8C196 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cps1Q8C196 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cps1Q8C196 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Gm6473-201ENSMUST00000188572 1210 ntBASIC20.73■□□□□ 0.91
Cps1Q8C196 AC130829.1-201ENSMUST00000221548 494 ntBASIC20.73■□□□□ 0.91
Cps1Q8C196 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cps1Q8C196 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cps1Q8C196 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cps1Q8C196 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms