Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3rf2Q8BZT2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3rf2Q8BZT2 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sh3rf2Q8BZT2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Gm13597-201ENSMUST00000121239 375 ntBASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Gm25925-201ENSMUST00000158314 306 ntBASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Gm17271-201ENSMUST00000165535 355 ntBASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf2Q8BZT2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms