Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.86□□□□□ -0.19
Ube3dQ8BX13 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3dQ8BX13 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Gm13884-201ENSMUST00000118103 829 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 App-207ENSMUST00000227737 2827 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.85□□□□□ -0.19
Ube3dQ8BX13 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3dQ8BX13 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Gm11452-201ENSMUST00000122376 690 ntBASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube3dQ8BX13 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3dQ8BX13 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3dQ8BX13 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3dQ8BX13 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3dQ8BX13 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3dQ8BX13 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3dQ8BX13 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ube3dQ8BX13 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube3dQ8BX13 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3dQ8BX13 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3dQ8BX13 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3dQ8BX13 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube3dQ8BX13 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3dQ8BX13 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms