Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SprnQ8BWU1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SprnQ8BWU1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SprnQ8BWU1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SprnQ8BWU1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SprnQ8BWU1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SprnQ8BWU1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SprnQ8BWU1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.79□□□□□ -0.2
SprnQ8BWU1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SprnQ8BWU1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SprnQ8BWU1 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.78□□□□□ -0.2
SprnQ8BWU1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SprnQ8BWU1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SprnQ8BWU1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Gm33142-201ENSMUST00000193913 867 ntBASIC13.77□□□□□ -0.21
SprnQ8BWU1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SprnQ8BWU1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.77□□□□□ -0.21
SprnQ8BWU1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SprnQ8BWU1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SprnQ8BWU1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SprnQ8BWU1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SprnQ8BWU1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SprnQ8BWU1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.76□□□□□ -0.21
SprnQ8BWU1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SprnQ8BWU1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms