Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Usp43Q8BUM9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Gm14722-201ENSMUST00000118943 689 ntBASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Usp43Q8BUM9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Gm27459-201ENSMUST00000184860 107 ntBASIC15.77■□□□□ 0.12
Usp43Q8BUM9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Gm43347-201ENSMUST00000200226 580 ntBASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Usp43Q8BUM9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Usp43Q8BUM9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp43Q8BUM9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp43Q8BUM9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp43Q8BUM9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp43Q8BUM9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms