Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdhr3Q8BL00 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdhr3Q8BL00 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdhr3Q8BL00 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Gm6623-201ENSMUST00000173570 544 ntBASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Gm7367-201ENSMUST00000057611 492 ntBASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdhr3Q8BL00 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.6□□□□□ -0.23
Cdhr3Q8BL00 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms