Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp2bQ8BJF9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Mir6404-201ENSMUST00000183699 94 ntBASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp2bQ8BJF9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 BC037039-201ENSMUST00000192003 2205 ntBASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp2bQ8BJF9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Gm6257-201ENSMUST00000163864 910 ntBASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Gm6623-201ENSMUST00000173570 544 ntBASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp2bQ8BJF9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms