Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Gm44430-201ENSMUST00000203376 995 ntBASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh20Q8BIZ0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh20Q8BIZ0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Gm17971-201ENSMUST00000190239 806 ntBASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh20Q8BIZ0 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms