Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SynbQ8BI41 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.9□□□□□ -0.02
SynbQ8BI41 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.9□□□□□ -0.02
SynbQ8BI41 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SynbQ8BI41 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Gm14140-201ENSMUST00000119999 995 ntBASIC14.89□□□□□ -0.03
SynbQ8BI41 Gm12260-201ENSMUST00000122447 411 ntBASIC14.89□□□□□ -0.03
SynbQ8BI41 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.89□□□□□ -0.03
SynbQ8BI41 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.89□□□□□ -0.03
SynbQ8BI41 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SynbQ8BI41 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SynbQ8BI41 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gm8097-201ENSMUST00000117903 829 ntBASIC14.88□□□□□ -0.03
SynbQ8BI41 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.88□□□□□ -0.03
SynbQ8BI41 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.88□□□□□ -0.03
SynbQ8BI41 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SynbQ8BI41 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SynbQ8BI41 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SynbQ8BI41 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SynbQ8BI41 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms