Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.71□□□□□ -0.21
Slc5a7Q8BGY9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc5a7Q8BGY9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc5a7Q8BGY9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc5a7Q8BGY9 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Gm5643-201ENSMUST00000117081 966 ntBASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc5a7Q8BGY9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc5a7Q8BGY9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms