Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim6Q8BGE7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim6Q8BGE7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim6Q8BGE7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Gm27011-201ENSMUST00000182352 972 ntBASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Gm18959-201ENSMUST00000208954 655 ntBASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms