Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Gm13616-201ENSMUST00000120600 222 ntBASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Gm9172-201ENSMUST00000212092 954 ntBASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf40bQ80W14 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Prpf40bQ80W14 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
Prpf40bQ80W14 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Prpf40bQ80W14 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Prpf40bQ80W14 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Prpf40bQ80W14 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf40bQ80W14 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Prpf40bQ80W14 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.93■□□□□ 0.46
Prpf40bQ80W14 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms