Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Gm26039-201ENSMUST00000158152 144 ntBASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ctdp1Q7TSG2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ctdp1Q7TSG2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Gm11355-201ENSMUST00000121120 306 ntBASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdp1Q7TSG2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Gm5587-201ENSMUST00000206270 674 ntBASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ctdp1Q7TSG2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms