Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Gm6257-201ENSMUST00000163864 910 ntBASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx4Q7TNK1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Gm12669-201ENSMUST00000122162 1009 ntBASIC15□□□□□ -0.01
Rfx4Q7TNK1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Gm4217-201ENSMUST00000182243 1002 ntBASIC15□□□□□ -0.01
Rfx4Q7TNK1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Gm7370-201ENSMUST00000219471 767 ntBASIC15□□□□□ -0.01
Rfx4Q7TNK1 AC154649.1-201ENSMUST00000227392 384 ntBASIC15□□□□□ -0.01
Rfx4Q7TNK1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Gm8784-201ENSMUST00000222096 1435 ntBASIC15□□□□□ -0.01
Rfx4Q7TNK1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx4Q7TNK1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Gm13168-201ENSMUST00000121771 632 ntBASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx4Q7TNK1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms